|
REFERENCES
Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.
| |
1
|
|
| |
2
|
B. DasGupta , X. He , T. Jiang , M. Li , J. Tromp , L. Zhang, On distances between phylogenetic trees, Proceedings of the eighth annual ACM-SIAM symposium on Discrete algorithms, p.427-436, January 05-07, 1997, New Orleans, Louisiana, United States
|
| |
3
|
O. Eulenstein and M. Vingron, On the equivalence of two tree mapping measures, Arbeitspapiere der GMD, 936, Bonn, Germany.
|
| |
4
|
O. Eulenstein, B. 5~rkin and M. Vingron, Duplication-based measures of difference between gene and species trees, to appear on or. Comput. Biology.
|
| |
5
|
|
| |
6
|
J. Felsenstein, Phylogenies from molecular sequences: Inference and reliability, Ann. Review Genet. 22(1988), 521-561.
|
| |
7
|
W. Fitch, Distinguishing homologous and analogous proteins, Syst. 2ool. 19(1970), 99-113.
|
| |
8
|
~V. Fitch and E. Margoliash, Construction of phylogenetic trees, Science 155(1967), 279-284.
|
| |
9
|
Z. Ga}i! and N. Megiddo, Cyclic ordering is NP- Complete, Theoret. Comput. Sci. 5(1977), 179-182.
|
| |
10
|
|
| |
11
|
M. Goodman, J. Czelusniak, G.W. Moore, A.E. Romero-Herrera and G. Matsuda, Fitting the gene lineage into its species lineage. A parsimony strategy illustrated by cladograms constructed from globin sequences, Syst. Zool. 28(1979), 132-163.
|
| |
12
|
P~ Guig6, I. Muchnik and T. Smith, Reconstruction of ancient molecular phylogeny, Molecular Phylogenetics and Evolution 6(1996), No. 2, 189- 213.
|
| |
13
|
B. Mirkin, I. Muchnik and T. Smith, A biologically meanJng~ model for comparing molecular phylogenies, J. Gomput. Biology 2(1995), 493-507.
|
| |
14
|
G. W. Moore, M. Goodman and J. Barnabas, An iterative approach from the standpoint of the additive hypothesis to the dendrogram problem posed by molecular data sets, J. Theoret. Biol. 38(1973), 423-457.
|
| |
15
|
M. Net, Molecular Evolutionary Genetics. Coltunbia University Press, New York, 1987.
|
| |
16
|
J. E. Neigel and J. C. Avise, Phylogenetic relationship of mitochondrial DNA under various demographic models of speciation, Evolutionary Processes and Theory, 515-534, Academic Press, New York, 1986.
|
| |
17
|
S. Ohno, Evolution by gene duplication. Springer- Verlag, Berlin, 1970.
|
| |
18
|
R.D.M. Page, Maps between trees and cladistic analysis of historical associations among genes, organisms, and areas, Syst. Biol. 43(1994), 58-77.
|
| |
19
|
R.D.M. Page and M. Charleston, From gene to orgaulsmal phylogeny: reconciled trees and the gene tree/species tree problem, Molecular Phylogenetics and Evolution 7(1997), 231-240.
|
| |
20
|
P. Pamilo and M. Net, Relationship between gene trees and species trees. Mol. Bio. Evol. 5 (1988), 568-583.
|
| |
21
|
M. Steel, The complexity of reconstructing trees from qualitative characters and subtrees, J. Classifications 9(1992), 91-116.
|
| |
22
|
D. Swofford and G. Olsen, Phylogeny reconstruction. In Molecular Systematics(edited by D. M. l:{illis et al.), Sinauer Associates, Sunderland, 411- 501.
|
| |
23
|
N. Takahata, Gene genealogy in three related population: Consistency probability between gene and population trees, Genetics 122(1989), 957-966.
|
| |
24
|
M. Waterman and T. Smith, On the similarity of dendrograms, J. Theoret. Biol. 73(1978), 789-800.
|
| |
25
|
L. Zhang, On a Mirkin-Muchnik-Smith conjecture for comparing molecular phylogenies, Y. Gomput. B~ology 4(1997), 17?4Ss.
|
|