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Algorithmic determination of core positions in the VL and VH domains of immunoglobulin molecules
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Source Annual Conference on Research in Computational Molecular Biology archive
Proceedings of the second annual international conference on Computational molecular biology table of contents
New York, New York, United States
Pages: 85 - 93  
Year of Publication: 1998
ISBN:0-89791-976-9
Authors
Israel Gelfand  Department of Mathematics, Rutgers University, New Brunswick, NJ
Alexander Kister  Department of Mathematics, Rutgers University, New Brunswick, NJ
Casimir Kulikowski  Department of Computer Science, Rutgers University, New Brunswick, NJ
Ognyan Stoyanov  Department of Mathematics, Rutgers University, New Brunswick, NJ
Sponsor
SIGACT: ACM Special Interest Group on Algorithms and Computation Theory
Publisher
ACM  New York, NY, USA
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REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
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Russ B. Altman and Mark Gerstein. Finding an average core st~ructure: Application to the globins. In Proc. Second Int. Conf. Intell. Sys. Mol. Biol., pages 161- 175. AAAI Press, 1994. Menlo Park, CA.
 
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Russ B. Altman and Mark Gerstein. Average core structures and variability measures for protein fatallies: Application to the immunoglobulins. J. Mol. Biol., 251:161-175, 1995.
 
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C. Chothia and A.M. Lesk. The relation between the divergence of sequence and structure in proteins. EMBO J., 5:823-826, 1986.
 
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C. Chothia and A.M. Lesk. Canonical structures for the hypervariable regions of the immunoglobulins. J. Mol. Biol., 196:901-917, 1987.
 
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Pt.D. Diamond. Protein $ci., 1:1279-1287, 1992.
 
6
israel Geffand, Alexander Kister, Casimir Kulikowski, and Ognyan Stoyanov. Algorithmic determination of immunoglobulin core positions in the vL and vH domains. (submitted), 1997.
 
7
Israel M. Gelfand and Alexander E. Kister. Analysis of the relation between the sequence and secondary and three-dimensional structures of immunoglobulin molecules. Proc. Natl. Acad. $ci. USA, Vol. 92:pp. 10884-10888, November 1995.
 
8
Israel M. Gelfand, Alexander E. Kister, and Dmitry Leshchiner. The invariant system of coordinates of antibody molecules: Prediction of the "standard" c'~ framework of vL and vH domains. Proc. Natl. Acad. Sci. USA, Vol. 93:pp. 3675-3678, April 1996.
 
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A. Godzik, J. Skolnick, and A. Kolinski. Protein Eng., 8:801-810, 1993.
 
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J. Selbig. Protein Eng., 8:339-351, 1995.
 
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A. Shapiro, J.D. Botha, A. Pastore, and A.M. Lesk. A method for the multiple superposition of structures. Acta CrystaUog. sect. A, 48:11-14, 1992.
 
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M.B. Swindells. A procedure for the automatic determination of hydrophobic cores in protein structures. Pro. tein $ci., 4:93-102, 1995.
 
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D.P. Yee and K.A. Dill. Protein $ci., 2:884-899, 1993.

Collaborative Colleagues:
Israel Gelfand: colleagues
Alexander Kister: colleagues
Casimir Kulikowski: colleagues
Ognyan Stoyanov: colleagues