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Nonparametric factor analysis with beta process priors
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Source ACM International Conference Proceeding Series; Vol. 382 archive
Proceedings of the 26th Annual International Conference on Machine Learning table of contents
Montreal, Quebec, Canada
Pages 777-784  
Year of Publication: 2009
ISBN:978-1-60558-516-1
Authors
John Paisley  Duke University, Durham, NC
Lawrence Carin  Duke University, Durham, NC
Sponsors
: MITACS
: NSF
Microsoft Research : Microsoft Research
Publisher
ACM  New York, NY, USA
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ABSTRACT

We propose a nonparametric extension to the factor analysis problem using a beta process prior. This beta process factor analysis (BP-FA) model allows for a dataset to be decomposed into a linear combination of a sparse set of factors, providing information on the underlying structure of the observations. As with the Dirichlet process, the beta process is a fully Bayesian conjugate prior, which allows for analytical posterior calculation and straightforward inference. We derive a varia-tional Bayes inference algorithm and demonstrate the model on the MNIST digits and HGDP-CEPH cell line panel datasets.


REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
1
Aldous, D. (1985). Exchangeability and related topics. École d'ete de probabilités de Saint-Flour XIII--1983, 1--198.
 
2
Beal, M. (2003). Variational algorithms for approximate bayesian inference. Doctoral dissertation, Gatsby Computational Neuroscience Unit, University College London.
 
3
Billingsley, P. (1995). Probability and measure, 3rd edition. Wiley Press, New York.
 
4
Ferguson, T. (1973). A bayesian analysis of some nonparametric problems. The Annals of Statistics, 1:209--230.
 
5
Griffiths, T. L., & Ghahramani, Z. (2005). Infinite latent feature models and the indian buffet process. Advances in Neural Information Processing Systems (pp. 475--482).
 
6
Hjort, N. L. (1990). Nonparametric bayes estimators based on beta processes in models for life history data. Annals of Statistics, 18:3, 1259--1294.
 
7
Knowles, D., & Ghahramani, Z. (2007). Infinite sparse factor analysis and infinite independent components analysis. 7th International Conference on Independent Component Analysis and Signal Separation.
 
8
Meeds, E., Ghahramani, Z., Neal, R., & Roweis, S. (2007). Modeling dyadic data with binary latent factors. Advances in Neural Information Processing Systems (pp. 977--984).
 
9
Paisley, J., & Carin, L. (2009). A stick-breaking construction of the beta process (Technical Report). Duke University, ee.duke.edu/~jwp4/StickBP.pdf.
 
10
Rai, P., & Dauméé, H. (2008). The infinite hierarchical factor regression model. Advances in Neural Information Processing Systems.
 
11
Rosenberg, N. A., Pritchard, J. K., Weber, J. L., Cann, H. M., Kidd, K. K., Zhivotovsky, L. A., & Feldman, M. W. (2002). Genetic structure of human populations. Science, 298, 2381--2385.
 
12
Sethuraman, J. (1994). A constructive definition of dirichlet priors. Statistica Sinica, 4:639--650.
13
 
14
Teh, Y. W., Görür, D., & Ghahramani, Z. (2007). Stick-breaking construction for the indian buffet process. Proceedings of the International Conference on Artificial Intelligence and Statistics.
 
15
Teh, Y. W., Jordan, M. I., Beal, M. J., & Blei, D. M. (2006). Hierarchical dirichlet processes. Journal of the American Statistical Association, 101:1566--1581.
 
16
Thibaux, R., & Jordan, M. I. (2007). Hierarchical beta processes and the indian buffet process. International Conference on Artificial Intelligence and Statistics.
 
17
 
18
West, M. (2003). Bayesian factor regression models in the "large p, small n" paradigm. Bayesian Statistics, 7, 723--732.

Collaborative Colleagues:
John Paisley: colleagues
Lawrence Carin: colleagues