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Feedback-control modeling for cellualr response mechanisms based on a gene regulatory networks under radiotherapy
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ACM/SIGEVO Summit on Genetic and Evolutionary Computation archive
Proceedings of the first ACM/SIGEVO Summit on Genetic and Evolutionary Computation table of contents
Shanghai, China
POSTER SESSION: Poster sessions table of contents
Pages 933-936  
Year of Publication: 2009
ISBN:978-1-60558-326-6
Authors
Jinpeng Qi  College of Information Sciences and Technology, Donghua University, Shanghai, China
Shihuang Shao  College of Information Sciences and Technology, Donghua University, shanghai, China
Zhihai Rong  College of Information Sciences and Technology, Donghua University, shanghai, China
Sponsors
SIGEVO: ACM Special Interest Group on Genetic and Evolutionary Computation
ACM: Association for Computing Machinery
Publisher
ACM  New York, NY, USA
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ABSTRACT

In response to genome stresses, cell can trigger the self-defensive mechanisms by regulating the vital genes and their complicated signal pathways. To illustrate the celluar response in fighting against DNA damage under radiotherapy, a feedback-control model of P53 stress response networks is proposed at single cell level. The kinetics of Double Strand Breaks(DSBs) generation and repair, ARF and ATM activation, P53-MDM2 regulation, toxins degradation, as well as feedback-control to ion radiation (IR) dose are presented.


REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
1
Kurt W. Kohn, Yves. Pommier. 2005, "Molecular interaction map of the P53 and MDM2 logic elements, which control the Off-On switch of P53 in response to DNA damage", Biochemical and Biophysical Research Communications, vol.331, pp.816--827.
 
2
G.W.A. Tjebbes, P.A. Kreijveldb, 2002, P53 tumor suppressor gene mutations in laryngeal cancer and in recurrent disease following radiation therapy, Oral Oncology, vol.38, pp.296--300.
 
3
M.S. Lindstrom, K.G. Wiman, 2003, Myc and E2F1 induce P53 through p14ARF-independent mechanisms in human fibroblasts, Oncogene, vol.22, pp.4993--5005.
 
4
Siim. Pauklin, Arnold. Kristjuhan, 2005, Toivo. Maimets et al., "ARF and ATM/ATR cooperate in P53-mediated apoptosis upon oncogenic stress", Biochemical and Biophysical Research Communications, vol.334, 386--394.
 
5
Lan. Ma, John. Wagner, 2005, "A plausible model for the digital response of P53 to DNA damage", PNAS, vol.2, no.40, pp.14266--14271.
 
6
Qi, Jin-Peng; Shao, Shi-Huang, 2007, Modeling and simulation of P53 gene regulatory networks under DNA damage, Journal of System Simulation, vol.19(14),pp.3321--3323.
 
7
J.-P. Qi, S.-H. Shao, D.-D. Li, and G.-P. Zhou, 2007, A dynamic model for the P53 stress response networks under ion radiation, Amino Acids, vol.33 (1),pp.75--83.
 
8
J.P.Qi, S.H.Shao,Y.Zhu, G.Z.Yu, A Mathematical Model of P53 Gene Regulatory Networks under Radiotherapy, Biosystems vol.90,no.3, pp.698--706, 2007.
 
9
Qi JP, Shao SH, Shen YZ, 2008, Cellular responding DNA damage: An improved modeling of P53 gene regulatory networks under ion radiation (IR), Applied Mathematics and Computation,205(1):73--83.
 
10
Qi JP, Shao SH, 2007, Model Study of P53 Gene Regulatory Network under DNA Damage, DCDIS B-APPLICATIONS & ALGORITHMS, 14(7):41--45.

Collaborative Colleagues:
Jinpeng Qi: colleagues
Shihuang Shao: colleagues
Zhihai Rong: colleagues