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An application of a multivariate estimation of distribution algorithm to cancer chemotherapy
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Genetic And Evolutionary Computation Conference archive
Proceedings of the 10th annual conference on Genetic and evolutionary computation table of contents
Atlanta, GA, USA
POSTER SESSION: Estimation of distribution algorithms posters table of contents
Pages 463-464  
Year of Publication: 2008
ISBN:978-1-60558-130-9
Authors
Alexander E.I. Brownlee  The Robert Gordon University, Aberdeen, UNK, Scotland Uk
Martin Pelikan  University of Missouri, St Louis, MO, USA
John A.W. McCall  The Robert Gordon University, Aberdeen, Scotland UK
Andrei Petrovski  The Robert Gordon University, Aberdeen, Scotland UK
Sponsors
ACM: Association for Computing Machinery
SIGEVO: ACM Special Interest Group on Genetic and Evolutionary Computation
Publisher
ACM  New York, NY, USA
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ABSTRACT

Chemotherapy treatment for cancer is a complex optimisation problem with a large number of interacting variables and constraints. A number of different heuristics have been applied to it with varying success. In this paper we expand on this by applying two estimation of distribution algorithms to the problem. One is UMDA and the other is hBOA, the first EDA using a multivariate probabilistic model to be applied to the chemotherapy problem. While instinct would lead us to predict that the more sophisticated algorithm would yield better performance on a complex problem like this, we show that it is outperformed by the algorithms using the simpler univariate model. We hypothesise that this is caused by the more sophisticated algorithm being impeded by the large number of interactions in the problem which though present, do not complicate the search for optima.


REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
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BROWNLEE, A., PELIKAN, M., MCCALL, J. AND PETROVSKI, A. 2008. An Application of a Multivariate Estimation of Distribution Algorithm to Cancer Chemotherapy. MEDAL Technical Report No. 2008005. Available from: http://medal.cs.umsl.edu/files/2008005.pdf
 
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MCCALL, J., PETROVSKI, A. AND SHAKYA, S. 2008. Evolutionary Algorithms for Cancer Chemotherapy Optimization. In Computational Intelligence in Bioinformatics, G.B. FOGEL, D.W. CORNE AND Y. PAN, Eds. Wiley, pp. 265--296.
 
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PELIKAN, M. 2005. Hierarchical Bayesian Optimization Algorithms. Springer Verlag.
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TAN, K.C., KHOR, E.F., CAI, J., HENG, C.M. AND LEE, T.H. 2002. Automating the drug scheduling of cancer chemotherapy via evolutionary computation. Artificial Intelligence in Medicine 25, 169--18

Collaborative Colleagues:
Alexander E.I. Brownlee: colleagues
Martin Pelikan: colleagues
John A.W. McCall: colleagues
Andrei Petrovski: colleagues