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Learning domain ontologies for Web service descriptions: an experiment in bioinformatics
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Source International World Wide Web Conference archive
Proceedings of the 14th international conference on World Wide Web table of contents
Chiba, Japan
SESSION: Semantic Web table of contents
Pages: 190 - 198  
Year of Publication: 2005
ISBN:1-59593-046-9
Authors
Marta Sabou  Vrije Universiteit Amsterdam
Chris Wroe  University of Manchester
Carole Goble  University of Manchester
Gilad Mishne  University of Amsterdam
Sponsor
ACM: Association for Computing Machinery
Publisher
ACM  New York, NY, USA
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Downloads (6 Weeks): 22,   Downloads (12 Months): 134,   Citation Count: 11
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ABSTRACT

The reasoning tasks that can be performed with semantic web service descriptions depend on the quality of the domain ontologies used to create these descriptions. However, building such domain ontologies is a time consuming and difficult task.We describe an automatic extraction method that learns domain ontologies for web service descriptions from textual documentations attached to web services. We conducted our experiments in the field of bioinformatics by learning an ontology from the documentation of the web services used in myGrid, a project that supports biology experiments on the Grid. Based on the evaluation of the extracted ontology in the context of the project, we conclude that the proposed extraction method is a helpful tool to support the process of building domain ontologies for web service descriptions.


REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
1
P.G. Baker, C.A. Goble, S. Bechhofer, N.W. Paton, R. Stevens, and A Brass. An Ontology for Bioinformatics Applications. Bioinformatics, 15(6):510--520, 1999.
 
2
C. Brewster, H. Alani, S. Dasmahapatra, and Y. Wilks. Data Driven Ontology Evaluation. LREC, 2004.
 
3
P. Buitelaar, S. Handschuh, and B. Magnini. ECAI Workshop on Ontology Learning and Population: Towards Evaluation of Text-based Methods in the Semantic Web and Knowledge Discovery Life Cycle. Valencia, Spain, August 2004.
 
4
P. Buitelaar, D. Olejnik, and M. Sintek. A Protege Plug-In for Ontology Extraction from Text Based on Linguistic Analysis. ESWS, 2004.
 
5
P. Cimiano, S. Staab, and J. Tane. Automatic acquisition of taxonomies from text: FCA meets NLP. ECML/PKDD Workshop on Adaptive Text Extraction and Mining. Cavtat--Dubrovnik, Croatia, 2003.
 
6
The OWL-S Services Coalition. OWL-S: Semantic Markup for Web Services. White Paper. www.daml.org/services/owl-s/1.0/owl-s.pdf, 2003.
 
7
H. Cunningham, D. Maynard, K. Bontcheva, and V. Tablan. GATE: A framework and graphical development environment for robust NLP tools and applications. ACL, 2002.
 
8
H. Cunningham, D. Maynard, and V. Tablan. JAPE: a Java Annotation Patterns Engine (Second Edition). Research Memorandum CS--00--10, Department of Computer Science, University of Sheffield, 2000.
 
9
R. Grishman and R. Kittredge, editors. Analyzing Language in Restricted Domains: Sublanguage Description and Processing. Lawrence Erlbaum Assoc., Hillsdale, NJ, 1986.
 
10
A. Hess and N. Kushmerick. Machine Learning for Annotating Semantic Web Services. AAAI Spring Symposium on Semantic Web Services, March 2004.
 
11
D. Lin. Dependency-based Evaluation of MINIPAR. Workshop on the Evaluation of Parsing Systems, First International Conference on Language Resources and Evaluation, Granada, Spain, May 1998.
 
12
P. Lord, S. Bechhofer, M.D. Wilkinson, G. Schiltz, D. Gessler, D. Hull, C. Goble, and L. Stein. Applying Semantic Web Services to bioinformatics: Experiences gained, lessons learnt. ISWC, 2004.
 
13
 
14
A. Maedche and S. Staab. Ontology learning. In S. Staab and R. Studer, editors, Handbook on Ontologies. Springer, 2004.
 
15
E. Motta, J. Domingue, L. Cabral, and M. Gaspari. IRS-II: A Framework and Infrastructure for Semantic Web Services. ISWC, 2003.
 
16
 
17
R. Navigli, P. Velardi, A. Cucchiarelli, and F. Neri. Quantitative and Qualitative Evaluation of the OntoLearn Ontology Learning System. ECAI Workshop on Ontology Learning and Population, 2004.
 
18
P.V. Ogren, K.B. Cohen, G.K. Acquaah-Mensah, J. Eberlein, and L. Hunter. The Compositional Structure of Gene Ontology Terms. Pacific Symposium on Biocomputing, 2004.
19
 
20
R. Porzel and R. Malaka. A Task-based Approach for Ontology Evaluation. ECAI Workshop on Ontology Learning and Population, Valencia, Spain, 2004.
 
21
A.L. Rector and J.E. Rogers. Ontological issues in using a description logic to represent medical concepts: Experience from GALEN. IMIA Working Group 6 Workshop, November 1999.
 
22
M.L. Reinberger and P. Spyns. Discovering Knowledge in Texts for the Learning of DOGMA-Inspired Ontologies. ECAI Workshop on Ontology Learning and Population, Valencia, Spain, August 2004.
 
23
M. Sabou. From Software APIs to Web Service Ontologies: a Semi-Automatic Extraction Method. ISWC, Hiroshima, Japan, November 2004.
 
24
C. Wroe, C. Goble, M. Greenwood, P. Lord, S. Miles, J. Papay, T. Payne, and L. Moreau. Automating Experiments Using Semantic Data on a Bioinformatics Grid. IEEE Intelligent Systems, 19(1):48--55, 2004.
 
25
C. Wroe, R. Stevens, C. Goble, A. Roberts, and M. Greenwood. A Suite of DAML+OIL Ontologies to Describe Bioinformatics Web Services and Data. Journal of Cooperative Information Science, 2003.

CITED BY  11

Collaborative Colleagues:
Marta Sabou: colleagues
Chris Wroe: colleagues
Carole Goble: colleagues
Gilad Mishne: colleagues