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Conformational statistics of the nitrogen linkage in glycopeptides using umbrella sampling
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Proceedings of the 1996 ACM symposium on Applied Computing table of contents
Philadelphia, Pennsylvania, United States
Pages: 38 - 43  
Year of Publication: 1996
ISBN:0-89791-820-7
Author
Anthony J. Duben  Southeast Missouri State University, Computer Science Department, Mail Stop 6800, 1 University Plaza, Cape Girardeau MO
Sponsors
SIGBIO: ACM Special Interest Group on Biomedical Computing
SIGADA: ACM Special Interest Group on Ada Programming Language
SIGCUE: ACM Special Interest Group on Computer Uses In Education
SIGICE: ACM Special Interest Group on Individual Computing Environment
SIGAPP: ACM Special Interest Group on Applied Computing
Publisher
ACM  New York, NY, USA
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REFERENCES

Note: OCR errors may be found in this Reference List extracted from the full text article. ACM has opted to expose the complete List rather than only correct and linked references.

 
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6
Bush, C.A.; Blumberg, K.; Brown, J.N. (1982) "Crystal Structure and Solution Conformation of 1-N-Acetyl-b- Glucopyranosyl Amine: A Model for the Glycopeptide Linkage", Biopolymers, 21, 1971 - 1977.
 
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Duben, A.J.; Bush, C.A. (1983) "Monte Carlo Calculations on the Conformations of Models for the Glycopeptide Linkage of Glycoproteins~, Arch. Biochem. Biophys., 225, 1 - 15
 
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1UPAC-IUB Commission on Biochemical Nomenclature - Conformation of Peptide Chains (1970) "RJPAC- 1UB Commision on Biochemical Nomenclature. Abbreviations and Symbols for the Description of the Conformation of Polypeptide Chains. Tentative Rules (1969)", Biochem., 9, 3471 - 3479
 
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Jeffrey, G.A.; Pople, J.A.; Radom, L. (1974) "The Application of ab initio Molecular Orbital Theory to Structural Moieties of Carbohydrates~, Carbohyd. Res., 38, 81 - 95
 
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Momany, F.A.; McGuire, R.F.; Burgess, A.W.; Scheraga, H.A. (1975) "Energy Parameters in Polypeptides. Vii. Geometric Parameters, Partial Atomic Charges, Nonbonded Interactions, and Intrinsic Torsional Potentials for the Naturally Occurring Amino Acids", J. Phys. Chem., 79, 2361 - 2381
 
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Okamoto, Y. (1994) ~Helix-Forming Tendencies of Nonpolar Amino Acids Predicted by Monte Carlo Simulated Annealing", Proteins: Struc. Func. Gen. , 19, 14 - 23
 
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Torrie, G.M.; Valleau, J.P. (1977)"Nonphysical Sampling Distributions in Monte Carlo Free-Energy Estimation: Umbrella Sampling", J. Comp. Phys., 23, 187- 199
 
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Weimar, T.; Meyer, B.; Peters. T. (1993) "Conformational Analysis of ct-D-Fuc-(1--~)-13-D- GIcNAc-OMe. One Dimensional Transient NOE E~ents and Metropolis Monte Carlo Simulations", J. Biomolec. N3dR, 3, 399 - 414


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